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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ChIP-seq
3
Hi-C
3
single cell RNA-seq
1
RRBS
Assay category
3
3D chromatin structure
3
DNA binding
3
Transcription
1
DNA methylation
Target of assay
6
control
Date released
7
July, 2019
3
November, 2017
Available data
20
bigWig
17
bam
11
bed broadPeak
11
bed narrowPeak
11
bigBed broadPeak
bigBed narrowPeak
9
fastq
8
bed bed3+
3
hdf5
3
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
10
Homo sapiens
Biosample type
tissue
10
primary cell
Organ
433
epithelium
412
pancreas
121
liver
119
connective tissue
82
vasculature
80
blood vessel
74
heart
68
artery
38
kidney
37
embryo
15
blood
15
bodily fluid
10
brain
9
vein
5
musculature of body
3
adipose tissue
2
eye
1
bone element
1
bone marrow
1
mammary gland
1
pericardium
Project
10
AMP
Genome assembly (visualization)
10
hg19
3
GRCh38
Lab
10
AMP-T2D consortium
biosample_type!
tissue
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
10 results
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ChIP-seq
Hi-C
single cell RNA-seq
RRBS
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
cerebellar granule cell
2
choroid plexus epithelial cell
1
1
Purkinje cell
1
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