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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
7
DNase-seq
2
ATAC-seq
Assay category
9
DNA accessibility
9
DNA binding
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
14
June, 2019
2
October, 2019
1
August, 2017
1
November, 2020
Available data
95
bam
89
bigWig
62
bed narrowPeak
58
fastq
21
bed bed3+
21
tsv
18
bigBed narrowPeak
14
tagAlign
7
bed broadPeak
7
bigBed broadPeak
6
bed bed3
4
bed bedgraph
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hdf5
Organism
18
Homo sapiens
Biosample type
15
primary cell
tissue
3
in vitro differentiated cells
Organ
309
liver
76
epithelium
54
blood
54
bodily fluid
29
pancreas
21
vasculature
18
connective tissue
17
blood vessel
17
kidney
13
vein
11
brain
9
musculature of body
6
heart
3
eye
Project
18
AMP
Genome assembly (visualization)
17
hg19
16
GRCh38
Lab
18
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
biosample_type!
tissue
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
DNase-seq
ATAC-seq
primary cell
cardiac fibroblast
3
3
mesenchymal stem cell
6
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
in vitro differentiated cells
adipocyte
1
2
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