Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
129
ChIP-seq
Assay category
199
Transcription
129
DNA binding
111
DNA accessibility
53
DNA methylation
8
3D chromatin structure
Target of assay
93
histone
93
histone modification
49
narrow histone mark
44
broad histone mark
27
control
9
transcription factor
8
RNA binding protein
1
chromatin remodeller
Date released
26
August, 2017
24
October, 2019
21
September, 2018
19
December, 2017
13
November, 2019
6
June, 2019
6
November, 2017
5
May, 2019
4
August, 2021
4
May, 2021
1
March, 2020
Available data
129
bam
101
bigWig
97
bed narrowPeak
72
fastq
36
bigBed narrowPeak
7
tagAlign
6
bed broadPeak
6
bigBed broadPeak
3
bed bed3+
Organism
129
Homo sapiens
Biosample type
92
primary cell
22
in vitro differentiated cells
15
cell line
Organ
397
liver
129
epithelium
101
pancreas
79
connective tissue
60
blood
60
bodily fluid
29
vasculature
26
blood vessel
25
kidney
22
embryo
17
vein
11
heart
10
musculature of body
9
brain
6
artery
3
eye
Project
127
AMP
2
T1D
Genome assembly (visualization)
101
hg19
97
GRCh38
Lab
129
AMP-T2D consortium
Audit category:
25
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
5
inconsistent control read length
biosample_type!
tissue
BIOSAMPLE
ASSAY
129 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
primary cell
endothelial cell of umbilical vein
17
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic ductal cell
13
epithelial cell of proximal tubule
10
+ See 6 more…
in vitro differentiated cells
hepatocyte
15
Hepatic endoderm
4
pancreatic PP cell
3
cell line
EndoC_BH1
15
See all biosamples
Download