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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
ChIP-seq
1
RRBS
1
small RNA-seq
1
total RNA-seq
Assay category
2
DNA binding
2
Transcription
1
DNA methylation
Target of assay
2
control
Date released
3
July, 2019
2
June, 2019
Available data
13
bam
11
bigWig
bed narrowPeak
9
bigBed narrowPeak
2
tsv
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
Organism
5
Homo sapiens
Biosample type
tissue
5
primary cell
Organ
370
epithelium
350
pancreas
102
liver
75
connective tissue
70
vasculature
68
blood vessel
62
heart
56
artery
25
kidney
23
embryo
15
blood
15
bodily fluid
10
brain
9
vein
5
musculature of body
3
adipose tissue
2
eye
1
bone element
1
bone marrow
1
mammary gland
1
pericardium
Project
5
AMP
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
5
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
biosample_type!
tissue
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
5 results
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ChIP-seq
RRBS
small RNA-seq
total RNA-seq
primary cell
skeletal muscle satellite cell
1
1
1
skeletal muscle cell
1
1
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