Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
ChIP-seq
3
MeRIP-seq
Assay category
84
DNA binding
Target of assay
70
histone
70
histone modification
42
broad histone mark
28
narrow histone mark
24
transcription factor
17
control
6
RNA binding protein
3
nucleotide modification
Date released
62
May, 2021
14
August, 2017
8
August, 2021
3
November, 2020
Available data
bam
370
bigWig
331
bed narrowPeak
257
fastq
151
tagAlign
79
bigBed narrowPeak
30
bed broadPeak
30
bigBed broadPeak
19
bed bed3+
3
tsv
Organism
87
Homo sapiens
Biosample type
tissue
40
in vitro differentiated cells
37
primary cell
10
cell line
Organ
14
connective tissue
7
liver
3
epithelium
3
pancreas
Project
87
AMP
Genome assembly (visualization)
36
hg19
Lab
58
Kyle Gaulton, UCSD
19
AMP-T2D consortium
7
Bing Ren, UCSD
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
inconsistent ontology term
biosample_type!
tissue
files.file_type!
bam
BIOSAMPLE
ASSAY
87 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
MeRIP-seq
in vitro differentiated cells
embryonic stem cell
25
adipocyte
14
neural progenitor cell
1
primary cell
CD8-positive, alpha-beta T cell
33
naive thymus-derived CD4-positive, alpha-beta T cell
2
monocyte
1
neutrophil
1
cell line
HepG2
7
EndoC_BH1
3
Download