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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
1
whole genome sequencing assay
Assay category
484
DNA binding
115
Transcription
31
DNA accessibility
4
3D chromatin structure
1
DNA methylation
1
DNA sequencing
Date released
2
August, 2021
1
December, 2018
1
November, 2019
1
October, 2019
Available data
2
bedpe bed3+
2
hic
1
bed bed3+
1
bigWig
1
fastq
1
hdf5
1
vcf
Organism
5
Homo sapiens
Biosample type
16
tissue
10
primary cell
5
cell line
4
in vitro differentiated cells
Organ
3
liver
2
pancreas
1
epithelium
Project
5
AMP
Genome assembly (visualization)
3
hg19
1
GRCh38
Lab
3
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
Audit category:
1
inconsistent assembly
BIOSAMPLE
ASSAY
5 results
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Hi-C
whole genome sequencing assay
cell line
HepG2
2
1
EndoC_BH1
1
Panc1
1
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