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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
113
total RNA-seq
92
ChIP-seq
19
ATAC-seq
6
MeRIP-seq
6
pCHi-C
5
STARR-seq
4
Hi-C
3
CRISPR genome editing followed by DNA sequencing
2
Capture-C
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
WGBS
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
19
DNA accessibility
Date released
16
May, 2021
2
March, 2020
1
January, 2018
Available data
10
bam
bed narrowPeak
3
bigWig
1
bed bed3
1
tsv
Organism
19
Homo sapiens
Biosample type
161
primary cell
52
tissue
21
in vitro differentiated cells
19
cell line
Organ
18
epithelium
18
pancreas
1
blood
1
bodily fluid
Project
19
AMP
Genome assembly (visualization)
3
hg19
Lab
19
AMP-T2D consortium
Audit category:
18
inconsistent ontology term
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
19 results
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ATAC-seq
cell line
EndoC_BH1
18
GM12878
1
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