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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
total RNA-seq
68
ChIP-seq
26
ATAC-seq
2
Capture-C
2
Hi-C
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
STARR-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
93
Transcription
Date released
78
February, 2021
9
August, 2021
4
May, 2021
1
March, 2020
1
November, 2019
Available data
93
tsv
84
bam
84
bigWig
Organism
93
Homo sapiens
Biosample type
1034
tissue
241
primary cell
114
in vitro differentiated cells
93
cell line
Organ
52
artery
52
blood vessel
52
heart
52
vasculature
31
epithelium
31
pancreas
9
liver
Project
93
AMP
Genome assembly (visualization)
84
GRCh38
84
hg19
Lab
84
AMP-T2D consortium
9
Bing Ren, UCSD
Audit category:
31
inconsistent ontology term
replication_type!
isogenic
BIOSAMPLE
ASSAY
93 results
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total RNA-seq
cell line
smooth muscle cell of the coronary artery
52
EndoC_BH1
31
HepG2
9
early embryonic cell
1
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