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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
Assay category
14
DNA binding
Target of assay
346
transcription factor
88
recombinant protein
83
control
59
RNA binding protein
27
histone
27
histone modification
19
chromatin remodeller
14
narrow histone mark
13
broad histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
4
November, 2019
3
October, 2019
2
August, 2021
2
November, 2017
1
January, 2019
1
March, 2020
1
May, 2021
Available data
14
bed narrowPeak
14
bigWig
12
bam
6
bigBed narrowPeak
3
fastq
1
bed broadPeak
1
bigBed broadPeak
Organism
14
Homo sapiens
Biosample type
306
tissue
110
primary cell
53
in vitro differentiated cells
14
cell line
Organ
9
pancreas
6
epithelium
4
liver
1
blood
1
bodily fluid
Project
12
AMP
2
T1D
Genome assembly (visualization)
14
hg19
12
GRCh38
Lab
12
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
inconsistent control read length
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
14 results
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ChIP-seq
cell line
EndoC_BH1
6
HepG2
4
Panc1
3
GM12878
1
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