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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
122
ChIP-seq
59
total RNA-seq
29
ATAC-seq
16
pCHi-C
1
DNAme array
Assay category
122
DNA binding
59
Transcription
29
DNA accessibility
1
DNA methylation
Target of assay
119
histone
119
histone modification
66
broad histone mark
53
narrow histone mark
3
control
Date released
324
November, 2017
227
May, 2021
148
May, 2020
144
February, 2021
134
May, 2022
94
February, 2023
73
September, 2018
64
October, 2019
62
November, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
August, 2021
48
July, 2018
43
April, 2018
31
July, 2019
28
December, 2018
23
January, 2019
16
November, 2019
12
March, 2020
12
November, 2020
8
January, 2021
7
August, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
October, 2022
3
August, 2018
3
June, 2018
3
March, 2023
2
October, 2018
1
January, 2018
Available data
176
bigWig
154
bam
128
bed narrowPeak
84
tagAlign
56
tsv
2
bed bed3+
Organism
227
Homo sapiens
Biosample type
206
primary cell
132
in vitro differentiated cells
40
tissue
21
cell line
Organ
21
epithelium
21
pancreas
1
bone element
1
bone marrow
1
connective tissue
Project
152
T1D
75
AMP
Genome assembly (visualization)
189
hg19
154
GRCh38
Lab
186
Kyle Gaulton, UCSD
41
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
BIOSAMPLE
ASSAY
227 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte
85
52
13
1
1
CD8-positive, alpha-beta T cell
33
2
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
+ See 11 more…
cell line
EndoC_BH1
1
4
16
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