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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
Assay category
9
DNA binding
Target of assay
5
transcription factor
4
control
Date released
8
February, 2021
1
November, 2017
Available data
556
bam
496
bigWig
401
fastq
380
bed narrowPeak
331
bigBed narrowPeak
119
tsv
46
bed broadPeak
46
bigBed broadPeak
9
tagAlign
bed bed3+
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
1
txt
1
vcf
Organism
9
Homo sapiens
Biosample type
238
tissue
97
primary cell
40
in vitro differentiated cells
9
cell line
Organ
6
artery
6
blood vessel
6
heart
6
vasculature
1
liver
Project
9
AMP
Genome assembly (visualization)
6
hg19
5
GRCh38
Lab
9
AMP-T2D consortium
Audit category:
inconsistent control read length
files.file_type!
bed bed3+
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
9 results
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ChIP-seq
cell line
smooth muscle cell of the coronary artery
6
iPSC derived cell line
2
HepG2
1
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