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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
4
total RNA-seq
1
DNase-seq
Assay category
23
DNA binding
4
Transcription
1
DNA accessibility
Target of assay
9
control
7
histone
7
histone modification
7
recombinant protein
7
transcription factor
4
broad histone mark
3
narrow histone mark
Date released
315
November, 2017
95
February, 2021
61
November, 2018
44
August, 2021
28
December, 2018
28
October, 2019
23
January, 2019
21
May, 2021
16
November, 2019
11
March, 2020
6
February, 2023
6
November, 2020
2
March, 2023
1
January, 2018
1
May, 2020
1
October, 2022
Available data
29
bam
20
bigWig
15
bed narrowPeak
8
bigBed narrowPeak
4
tsv
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
hdf5
Organism
28
Homo sapiens
Biosample type
238
tissue
32
primary cell
28
cell line
8
in vitro differentiated cells
Organ
15
kidney
13
pancreas
2
epithelium
Project
28
AMP
Genome assembly (visualization)
18
GRCh38
18
hg19
Lab
28
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
28 results
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ChIP-seq
total RNA-seq
DNase-seq
cell line
Panc1
13
RCC 7860 HIF1a re-expression
4
1
RCC 7860 HIF2a over-expression
3
1
RCC 7860 vector
3
1
glomerular visceral epithelial cell
1
1
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