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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
4
total RNA-seq
DNase-seq
Assay category
23
DNA binding
4
Transcription
Target of assay
9
control
7
histone
7
histone modification
7
recombinant protein
7
transcription factor
4
broad histone mark
3
narrow histone mark
Date released
315
November, 2017
95
February, 2021
61
November, 2018
44
August, 2021
28
December, 2018
27
October, 2019
23
January, 2019
21
May, 2021
16
November, 2019
11
March, 2020
6
February, 2023
6
November, 2020
2
March, 2023
1
January, 2018
1
May, 2020
1
October, 2022
Available data
27
bam
18
bigWig
13
bed narrowPeak
6
bigBed narrowPeak
4
tsv
bed bed3+
1
hdf5
Organism
27
Homo sapiens
Biosample type
238
tissue
30
primary cell
27
cell line
8
in vitro differentiated cells
Organ
14
kidney
13
pancreas
1
epithelium
Project
27
AMP
Genome assembly (visualization)
17
GRCh38
17
hg19
Lab
27
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
files.file_type!
bed bed3+
assay_title!
DNase-seq
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
total RNA-seq
cell line
Panc1
13
RCC 7860 HIF1a re-expression
4
1
RCC 7860 HIF2a over-expression
3
1
RCC 7860 vector
3
1
glomerular visceral epithelial cell
1
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