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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ChIP-seq
Assay category
23
DNA binding
Target of assay
303
transcription factor
89
recombinant protein
80
control
55
RNA binding protein
23
histone
23
histone modification
20
chromatin remodeller
12
narrow histone mark
11
broad histone mark
3
nucleotide modification
1
other context
1
other post-translational modification
Date released
10
November, 2019
7
October, 2019
3
August, 2021
January, 2019
1
March, 2020
1
May, 2021
1
November, 2017
Available data
36
bigWig
34
bam
34
bed narrowPeak
19
bigBed narrowPeak
15
fastq
bed broadPeak
14
bigBed broadPeak
11
tagAlign
Organism
23
Homo sapiens
Biosample type
586
tissue
221
primary cell
112
in vitro differentiated cells
23
cell line
2
stem cell
Organ
19
pancreas
12
epithelium
4
liver
Project
21
AMP
2
T1D
Genome assembly (visualization)
22
hg19
19
GRCh38
Lab
20
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
12
inconsistent ontology term
Audit category:
1
missing controlled_by
files.file_type!
bed broadPeak
month_released!
January, 2019
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
cell line
EndoC_BH1
12
Panc1
7
HepG2
4
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