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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
Assay category
60
DNA binding
Target of assay
306
transcription factor
89
recombinant protein
79
control
60
RNA binding protein
26
chromatin remodeller
21
histone
21
histone modification
11
narrow histone mark
10
broad histone mark
3
nucleotide modification
1
other context
1
other post-translational modification
Date released
30
November, 2017
21
November, 2018
6
January, 2019
2
December, 2018
August, 2021
1
November, 2019
Available data
64
bam
63
fastq
62
bed narrowPeak
62
bigWig
61
bigBed narrowPeak
4
bed broadPeak
bigBed broadPeak
1
tar
Organism
60
Homo sapiens
Biosample type
60
cell line
28
tissue
11
in vitro differentiated cells
5
primary cell
Organ
49
liver
10
blood
10
bodily fluid
1
epithelium
1
pancreas
Project
60
AMP
Genome assembly (visualization)
57
hg19
55
GRCh38
Lab
60
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
4
inconsistent control read length
3
inconsistent control run_type
files.file_type!
bigBed broadPeak
month_released!
August, 2021
BIOSAMPLE
ASSAY
60 results
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ChIP-seq
cell line
HepG2
49
GM12878
10
EndoC_BH1
1
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