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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
Assay category
27
DNA binding
Target of assay
317
transcription factor
89
recombinant protein
83
control
61
RNA binding protein
26
chromatin remodeller
24
histone
24
histone modification
13
narrow histone mark
11
broad histone mark
3
nucleotide modification
1
other context
1
other post-translational modification
Date released
12
November, 2017
7
November, 2018
6
January, 2019
2
December, 2018
Available data
32
bam
32
bed narrowPeak
32
bigBed narrowPeak
32
bigWig
32
fastq
5
bed broadPeak
bigBed broadPeak
Organism
27
Homo sapiens
Biosample type
27
cell line
5
tissue
3
in vitro differentiated cells
Organ
17
liver
10
blood
10
bodily fluid
Project
27
AMP
Genome assembly (visualization)
27
hg19
25
GRCh38
Lab
27
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
10
inconsistent control read length
8
inconsistent control run_type
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
cell line
HepG2
17
GM12878
10
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