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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
Assay category
11
DNA binding
Target of assay
5
transcription factor
4
control
2
histone
2
histone modification
1
broad histone mark
1
narrow histone mark
Date released
8
February, 2021
3
November, 2017
Available data
582
bam
522
bigWig
427
fastq
404
bed narrowPeak
bigBed narrowPeak
119
tsv
59
bed broadPeak
59
bigBed broadPeak
20
tagAlign
3
bed bed3+
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
1
txt
1
vcf
Organism
11
Homo sapiens
Biosample type
181
tissue
89
primary cell
40
in vitro differentiated cells
11
cell line
Organ
6
artery
6
blood vessel
6
heart
6
vasculature
3
liver
Project
11
AMP
Genome assembly (visualization)
8
hg19
5
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
2
inconsistent control read length
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
cell line
smooth muscle cell of the coronary artery
6
HepG2
3
iPSC derived cell line
2
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