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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
total RNA-seq
5
pCHi-C
Assay category
9
Transcription
Date released
9
August, 2021
4
March, 2020
1
May, 2020
Available data
582
bam
bigWig
427
fastq
404
bed narrowPeak
355
bigBed narrowPeak
119
tsv
59
bed broadPeak
59
bigBed broadPeak
20
tagAlign
3
bed bed3+
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
1
txt
1
vcf
Organism
14
Homo sapiens
Biosample type
158
tissue
18
primary cell
14
cell line
4
in vitro differentiated cells
4
stem cell
Organ
10
liver
2
kidney
1
mammary gland
Project
14
AMP
Lab
9
Bing Ren, UCSD
5
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
bigWig
BIOSAMPLE
ASSAY
14 results
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total RNA-seq
pCHi-C
cell line
HepG2
9
1
MCF-7
1
RCC 7860 VHL
1
RCC 7860 vector
1
fibroblast cell line
1
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