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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
total RNA-seq
9
ATAC-seq
8
ChIP-seq
1
pCHi-C
Assay category
52
Transcription
9
DNA accessibility
8
DNA binding
Target of assay
5
transcription factor
3
control
Date released
315
November, 2017
70
February, 2021
61
November, 2018
41
August, 2021
28
December, 2018
23
January, 2019
17
October, 2019
6
February, 2023
4
March, 2020
2
March, 2023
1
January, 2018
1
May, 2020
1
October, 2022
Available data
69
bam
57
bigWig
52
tsv
14
bed narrowPeak
8
tagAlign
1
bed bed3
1
bed bed3+
Organism
70
Homo sapiens
Biosample type
461
tissue
70
cell line
48
primary cell
8
in vitro differentiated cells
Organ
66
artery
66
blood vessel
66
heart
66
vasculature
2
liver
Project
70
AMP
Genome assembly (visualization)
67
hg19
66
GRCh38
Lab
70
AMP-T2D consortium
Audit category:
inconsistent ontology term
1
inconsistent replicate
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
70 results
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total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
8
6
HepG2
1
1
iPSC derived cell line
2
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