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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ATAC-seq
14
ChIP-seq
5
total RNA-seq
1
Hi-C
Assay category
17
DNA accessibility
14
DNA binding
5
Transcription
1
3D chromatin structure
Target of assay
11
histone
11
histone modification
6
broad histone mark
5
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
315
November, 2017
96
February, 2021
61
November, 2018
44
August, 2021
30
October, 2019
28
December, 2018
23
January, 2019
21
May, 2021
16
November, 2019
11
March, 2020
6
February, 2023
6
November, 2020
2
March, 2023
1
January, 2018
1
May, 2020
1
October, 2022
Available data
20
bam
17
bigWig
13
bed narrowPeak
5
tsv
1
bedpe bed3+
1
hic
Organism
37
Homo sapiens
Biosample type
206
primary cell
137
in vitro differentiated cells
80
tissue
37
cell line
Organ
37
epithelium
37
pancreas
Project
36
AMP
1
T1D
Genome assembly (visualization)
19
hg19
18
GRCh38
Lab
37
AMP-T2D consortium
Audit category:
37
inconsistent ontology term
BIOSAMPLE
ASSAY
37 results
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ATAC-seq
ChIP-seq
total RNA-seq
Hi-C
cell line
EndoC_BH1
17
14
5
1
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