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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
4
total RNA-seq
1
Hi-C
Assay category
10
DNA binding
4
Transcription
1
3D chromatin structure
Target of assay
9
control
1
broad histone mark
1
histone
1
histone modification
Date released
82
February, 2021
66
November, 2017
30
August, 2021
20
May, 2021
15
October, 2019
10
March, 2020
8
January, 2019
6
February, 2023
6
November, 2020
5
November, 2018
4
November, 2019
2
March, 2023
1
December, 2018
1
January, 2018
1
May, 2020
1
October, 2022
Available data
29
bam
20
bigWig
bed narrowPeak
8
bigBed narrowPeak
4
tsv
2
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
hdf5
Organism
15
Homo sapiens
Biosample type
91
tissue
15
cell line
13
primary cell
6
in vitro differentiated cells
Organ
8
pancreas
7
kidney
1
epithelium
Project
15
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
15
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
1
inconsistent assembly
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
15 results
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Clear Filters
ChIP-seq
total RNA-seq
Hi-C
cell line
Panc1
7
1
RCC 7860 HIF1a re-expression
1
1
RCC 7860 HIF2a over-expression
1
1
RCC 7860 vector
1
1
glomerular visceral epithelial cell
1
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