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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
4
total RNA-seq
1
Hi-C
Assay category
4
Transcription
1
3D chromatin structure
Date released
79
February, 2021
26
August, 2021
20
May, 2021
10
March, 2020
6
February, 2023
6
November, 2020
5
January, 2019
5
October, 2019
2
March, 2023
2
November, 2019
1
December, 2018
1
January, 2018
1
May, 2020
1
November, 2018
1
October, 2022
Available data
7
bigWig
6
bam
4
tsv
2
bed bed3+
bed narrowPeak
2
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
1
hdf5
Organism
5
Homo sapiens
Biosample type
41
tissue
6
in vitro differentiated cells
5
cell line
5
primary cell
Organ
4
kidney
1
epithelium
1
pancreas
Project
5
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
5
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
1
inconsistent assembly
files.file_type!
bed narrowPeak
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
5 results
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total RNA-seq
Hi-C
cell line
Panc1
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular visceral epithelial cell
1
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