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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
4
total RNA-seq
2
STARR-seq
1
DNase-seq
Assay category
10
DNA binding
4
Transcription
1
DNA accessibility
Target of assay
7
recombinant protein
7
transcription factor
3
control
Date released
15
October, 2019
2
August, 2021
March, 2020
Available data
15
bam
12
bigWig
8
bed narrowPeak
4
tsv
1
bigBed narrowPeak
Organism
17
Homo sapiens
Biosample type
299
tissue
36
primary cell
17
cell line
Organ
401
liver
87
pancreas
74
epithelium
66
artery
66
blood vessel
66
heart
66
vasculature
61
blood
61
bodily fluid
17
kidney
8
embryo
Project
17
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
15
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
13
inconsistent ontology term
month_released!
March, 2020
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
total RNA-seq
STARR-seq
DNase-seq
cell line
RCC 7860 HIF1a re-expression
4
1
RCC 7860 HIF2a over-expression
3
1
RCC 7860 vector
3
1
HEK293T
2
glomerular visceral epithelial cell
1
1
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