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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ChIP-seq
4
total RNA-seq
2
STARR-seq
2
pCHi-C
1
DNase-seq
Assay category
7
DNA binding
4
Transcription
1
DNA accessibility
Target of assay
7
recombinant protein
7
transcription factor
control
Date released
12
October, 2019
2
August, 2021
2
March, 2020
Available data
12
bam
12
bigWig
8
bed narrowPeak
6
tsv
1
bigBed narrowPeak
Organism
16
Homo sapiens
Biosample type
293
tissue
33
primary cell
16
cell line
Organ
82
liver
81
pancreas
74
epithelium
64
artery
64
blood vessel
64
heart
64
vasculature
55
blood
55
bodily fluid
16
kidney
8
embryo
1
mammary gland
Project
16
AMP
Genome assembly (visualization)
12
GRCh38
12
hg19
Lab
14
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
12
inconsistent ontology term
target.investigated_as!
control
month_released!
November, 2017
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
total RNA-seq
STARR-seq
pCHi-C
DNase-seq
cell line
RCC 7860 HIF1a re-expression
3
1
RCC 7860 vector
2
1
1
RCC 7860 HIF2a over-expression
2
1
HEK293T
2
glomerular visceral epithelial cell
1
1
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