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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
Assay category
35
DNA binding
Target of assay
352
transcription factor
88
recombinant protein
63
RNA binding protein
35
histone
35
histone modification
30
chromatin remodeller
18
narrow histone mark
17
broad histone mark
2
other context
2
other post-translational modification
Date released
13
November, 2017
10
November, 2019
6
October, 2019
3
August, 2021
1
January, 2019
1
March, 2020
1
May, 2021
Available data
37
bigWig
35
bam
35
bed narrowPeak
20
bigBed narrowPeak
16
fastq
14
bed broadPeak
14
bigBed broadPeak
11
tagAlign
Organism
35
Homo sapiens
Biosample type
484
tissue
216
primary cell
78
in vitro differentiated cells
35
cell line
2
stem cell
Organ
18
pancreas
16
liver
12
epithelium
1
blood
1
bodily fluid
Project
33
AMP
2
T1D
Genome assembly (visualization)
35
hg19
32
GRCh38
Lab
32
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
12
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
9
inconsistent control read length
BIOSAMPLE
ASSAY
35 results
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ChIP-seq
cell line
HepG2
16
EndoC_BH1
12
Panc1
6
GM12878
1
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