Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
399
ChIP-seq
Assay category
399
DNA binding
Target of assay
361
transcription factor
89
recombinant protein
83
control
65
RNA binding protein
38
histone
38
histone modification
30
chromatin remodeller
19
broad histone mark
19
narrow histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
256
November, 2017
57
November, 2018
25
December, 2018
15
January, 2019
14
August, 2021
14
October, 2019
11
November, 2019
5
February, 2021
1
March, 2020
1
May, 2021
Available data
393
bigWig
387
bed narrowPeak
384
bam
353
fastq
348
bigBed narrowPeak
58
bed broadPeak
58
bigBed broadPeak
16
tagAlign
3
tar
Organism
399
Homo sapiens
Biosample type
681
tissue
399
cell line
247
primary cell
161
in vitro differentiated cells
2
stem cell
Organ
315
liver
52
blood
52
bodily fluid
20
pancreas
13
epithelium
7
kidney
4
artery
4
blood vessel
4
heart
4
vasculature
Project
397
AMP
2
T1D
Genome assembly (visualization)
389
hg19
341
GRCh38
Lab
385
AMP-T2D consortium
14
Bing Ren, UCSD
Audit category:
20
inconsistent ontology term
1
inconsistent control
Audit category:
13
missing controlled_by
Audit category:
26
inconsistent control read length
8
inconsistent control run_type
BIOSAMPLE
ASSAY
399 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
315
GM12878
52
EndoC_BH1
13
Panc1
7
smooth muscle cell of the coronary artery
4
+ See 4 more…
See all biosamples
Download