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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
CRISPR genome editing followed by DNA sequencing
ChIP-seq
HiChIP
2
total RNA-seq
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
4
Transcription
Date released
3
February, 2023
2
March, 2020
2
March, 2023
Available data
2
bam
2
bigWig
2
tsv
Organism
5
Homo sapiens
Biosample type
445
primary cell
95
tissue
7
cell line
2
stem cell
Organ
2
epithelium
2
pancreas
Project
AMP
5
T1D
2
community
Genome assembly (visualization)
2
GRCh38
2
hg19
Lab
3
Kyle Gaulton, UCSD
2
AMP-T2D consortium
2
Anna Gloyn, Oxford
Audit category:
2
inconsistent ontology term
assay_title!
ChIP-seq
HiChIP
award.project!
AMP
BIOSAMPLE
ASSAY
7 results
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CRISPR genome editing followed by DNA sequencing
total RNA-seq
shRNA RNA-seq
siRNA RNA-seq
cell line
EndoC_BH1
3
2
EndoC-BH1
1
1
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