Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
ChIP-seq
99
total RNA-seq
28
ATAC-seq
6
MeRIP-seq
4
pCHi-C
3
CRISPR genome editing followed by DNA sequencing
3
STARR-seq
2
Capture-C
2
DNase-seq
2
Hi-C
2
HiChIP
1
CRISPR genome editing followed by sgRNA sequencing
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
28
DNA accessibility
Date released
16
May, 2021
8
February, 2021
6
March, 2020
1
January, 2018
1
November, 2019
Available data
9
bam
9
bed narrowPeak
5
tsv
3
bigWig
Organism
32
Homo sapiens
Biosample type
263
tissue
216
primary cell
47
in vitro differentiated cells
32
cell line
4
stem cell
Organ
19
epithelium
19
pancreas
8
artery
8
blood vessel
8
heart
8
vasculature
liver
2
kidney
1
blood
1
bodily fluid
1
mammary gland
Project
32
AMP
Genome assembly (visualization)
12
hg19
9
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
32 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
pCHi-C
cell line
EndoC_BH1
19
smooth muscle cell of the coronary artery
8
GM12878
1
MCF-7
1
RCC 7860 VHL
1
RCC 7860 vector
1
fibroblast cell line
1
See all biosamples
Download