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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
Assay category
18
DNA binding
Target of assay
352
transcription factor
85
recombinant protein
62
RNA binding protein
37
histone
37
histone modification
30
chromatin remodeller
19
narrow histone mark
18
broad histone mark
13
control
2
other context
2
other post-translational modification
Date released
8
November, 2017
6
November, 2019
3
October, 2019
1
August, 2021
Available data
18
bigWig
17
bam
17
bed narrowPeak
10
bigBed narrowPeak
8
bed broadPeak
8
bigBed broadPeak
8
fastq
6
tagAlign
Organism
18
Homo sapiens
Biosample type
198
tissue
118
primary cell
36
in vitro differentiated cells
18
cell line
1
stem cell
Organ
9
liver
9
pancreas
6
epithelium
Project
18
AMP
Genome assembly (visualization)
18
hg19
16
GRCh38
Lab
17
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
6
inconsistent ontology term
Audit category:
6
inconsistent control read length
BIOSAMPLE
ASSAY
18 results
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ChIP-seq
cell line
HepG2
9
EndoC_BH1
6
Panc1
3
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