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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
total RNA-seq
13
ATAC-seq
8
ChIP-seq
1
pCHi-C
Assay category
100
Transcription
13
DNA accessibility
8
DNA binding
Target of assay
5
transcription factor
3
control
Date released
315
November, 2017
153
May, 2021
122
February, 2021
86
August, 2021
68
August, 2017
61
November, 2018
43
December, 2017
39
February, 2018
38
October, 2019
28
December, 2018
23
January, 2019
22
February, 2023
21
November, 2019
19
March, 2020
6
November, 2020
5
January, 2018
2
December, 2019
2
March, 2023
1
August, 2018
1
May, 2020
1
October, 2022
Available data
117
bam
105
bigWig
100
tsv
14
bed narrowPeak
8
tagAlign
4
bed bedgraph
1
bed bed3
1
bed bed3+
Organism
122
Homo sapiens
Biosample type
545
tissue
96
cell line
48
primary cell
26
in vitro differentiated cells
Organ
66
artery
66
blood vessel
66
heart
66
vasculature
26
epithelium
26
pancreas
8
connective tissue
2
liver
Project
122
AMP
Genome assembly (visualization)
119
hg19
114
GRCh38
Lab
122
AMP-T2D consortium
Audit category:
44
inconsistent ontology term
1
inconsistent replicate
BIOSAMPLE
ASSAY
122 results
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total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
8
6
EndoC_BH1
26
HepG2
1
1
iPSC derived cell line
2
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
18
adipocyte
4
4
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