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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
Assay category
14
DNA binding
Target of assay
356
transcription factor
89
recombinant protein
79
control
65
RNA binding protein
30
chromatin remodeller
27
histone
27
histone modification
14
narrow histone mark
13
broad histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
4
November, 2019
3
October, 2019
2
August, 2021
2
November, 2017
1
January, 2019
1
March, 2020
1
May, 2021
Available data
19
bigWig
18
bed narrowPeak
17
bam
10
bigBed narrowPeak
8
fastq
6
bed broadPeak
6
bigBed broadPeak
tagAlign
Organism
14
Homo sapiens
Biosample type
199
tissue
68
primary cell
43
in vitro differentiated cells
14
cell line
1
stem cell
Organ
9
pancreas
6
epithelium
4
liver
1
blood
1
bodily fluid
Project
12
AMP
2
T1D
Genome assembly (visualization)
14
hg19
12
GRCh38
Lab
12
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
6
inconsistent ontology term
Audit category:
1
missing controlled_by
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
14 results
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Clear Filters
ChIP-seq
cell line
EndoC_BH1
6
HepG2
4
Panc1
3
GM12878
1
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