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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
total RNA-seq
9
ATAC-seq
3
ChIP-seq
1
pCHi-C
Assay category
78
Transcription
9
DNA accessibility
3
DNA binding
Target of assay
transcription factor
3
control
Date released
91
February, 2021
74
November, 2017
33
August, 2021
23
October, 2019
21
May, 2021
15
November, 2019
11
March, 2020
9
January, 2019
6
February, 2023
6
November, 2020
4
November, 2018
3
December, 2018
2
March, 2023
1
January, 2018
1
May, 2020
1
October, 2022
Available data
90
bam
78
bigWig
78
tsv
9
bed narrowPeak
3
tagAlign
1
bed bed3
1
bed bed3+
Organism
91
Homo sapiens
Biosample type
545
tissue
91
cell line
48
primary cell
26
in vitro differentiated cells
Organ
62
artery
62
blood vessel
62
heart
62
vasculature
26
epithelium
26
pancreas
2
liver
Project
91
AMP
Genome assembly (visualization)
88
hg19
87
GRCh38
Lab
91
AMP-T2D consortium
Audit category:
26
inconsistent ontology term
1
inconsistent replicate
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
91 results
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total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
cell line
smooth muscle cell of the coronary artery
52
8
2
EndoC_BH1
26
HepG2
1
1
iPSC derived cell line
1
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