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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
total RNA-seq
3
ChIP-seq
2
STARR-seq
2
pCHi-C
Assay category
4
Transcription
3
DNA binding
Target of assay
3
control
Date released
7
October, 2019
2
August, 2021
2
March, 2020
Available data
15
bam
12
bigWig
bed narrowPeak
6
tsv
1
bigBed narrowPeak
Organism
11
Homo sapiens
Biosample type
146
tissue
14
primary cell
11
cell line
Organ
93
liver
71
pancreas
64
epithelium
54
artery
54
blood vessel
54
heart
54
vasculature
11
kidney
8
embryo
7
blood
7
bodily fluid
1
mammary gland
Project
11
AMP
Genome assembly (visualization)
4
GRCh38
4
hg19
Lab
9
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
8
inconsistent ontology term
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
11 results
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total RNA-seq
ChIP-seq
STARR-seq
pCHi-C
cell line
RCC 7860 vector
1
1
1
HEK293T
2
RCC 7860 HIF1a re-expression
1
1
RCC 7860 HIF2a over-expression
1
1
RCC 7860 VHL
1
glomerular visceral epithelial cell
1
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