Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ATAC-seq
9
ChIP-seq
6
MeRIP-seq
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
Hi-C
Assay category
18
DNA accessibility
9
DNA binding
1
3D chromatin structure
Target of assay
11
control
3
nucleotide modification
1
broad histone mark
1
histone
1
histone modification
Date released
16
May, 2021
7
October, 2019
6
November, 2020
3
November, 2019
2
August, 2021
2
March, 2020
1
February, 2023
Available data
9
bam
2
bigWig
1
bedpe bed3+
1
hic
1
tsv
Organism
36
Homo sapiens
Biosample type
154
primary cell
119
tissue
37
cell line
1
in vitro differentiated cells
Organ
133
liver
37
pancreas
30
epithelium
7
blood
7
bodily fluid
7
kidney
2
artery
2
blood vessel
2
heart
2
vasculature
1
mammary gland
Project
37
AMP
Genome assembly (visualization)
58
hg19
GRCh38
Lab
31
AMP-T2D consortium
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
29
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
37 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
MeRIP-seq
Capture-C
CRISPR genome editing followed by sgRNA sequencing
Hi-C
cell line
EndoC_BH1
18
2
6
2
1
1
Panc1
7
See all biosamples
Download