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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
1
ATAC-seq
1
Hi-C
1
total RNA-seq
Assay category
9
DNA binding
1
3D chromatin structure
1
DNA accessibility
1
Transcription
Target of assay
10
histone
10
histone modification
6
broad histone mark
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
308
November, 2017
96
February, 2021
61
November, 2018
42
August, 2021
28
December, 2018
27
October, 2019
22
January, 2019
20
May, 2021
12
November, 2019
10
March, 2020
6
February, 2023
6
November, 2020
2
March, 2023
1
January, 2018
1
May, 2020
1
October, 2022
Available data
11
bam
8
bed narrowPeak
8
bigWig
1
bedpe bed3+
1
hic
1
tsv
Organism
12
Homo sapiens
Biosample type
40
tissue
12
cell line
5
in vitro differentiated cells
Organ
12
epithelium
12
pancreas
Project
12
AMP
Genome assembly (visualization)
10
hg19
9
GRCh38
Lab
12
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
12 results
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ChIP-seq
ATAC-seq
Hi-C
total RNA-seq
cell line
EndoC_BH1
9
1
1
1
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