Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
total RNA-seq
3
ChIP-seq
2
STARR-seq
2
pCHi-C
1
DNase-seq
Assay category
4
Transcription
3
DNA binding
1
DNA accessibility
Target of assay
7
recombinant protein
transcription factor
3
control
Date released
8
October, 2019
2
August, 2021
2
March, 2020
Available data
8
bam
6
tsv
5
bigWig
1
bed narrowPeak
1
bigBed narrowPeak
Organism
12
Homo sapiens
Biosample type
298
tissue
34
primary cell
12
cell line
Organ
104
liver
91
pancreas
78
epithelium
62
artery
62
blood vessel
62
heart
62
vasculature
12
kidney
10
blood
10
bodily fluid
8
embryo
1
mammary gland
Project
12
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
10
AMP-T2D consortium
2
Bing Ren, UCSD
Audit category:
8
inconsistent ontology term
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
12 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
STARR-seq
pCHi-C
DNase-seq
cell line
RCC 7860 vector
1
1
1
HEK293T
2
RCC 7860 HIF1a re-expression
1
1
RCC 7860 HIF2a over-expression
1
1
glomerular visceral epithelial cell
1
1
RCC 7860 VHL
1
See all biosamples
Download