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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
Assay category
65
DNA binding
Target of assay
361
transcription factor
89
recombinant protein
83
control
65
RNA binding protein
38
histone
38
histone modification
30
chromatin remodeller
19
broad histone mark
19
narrow histone mark
nucleotide modification
2
other context
2
other post-translational modification
Date released
34
November, 2017
21
November, 2018
6
January, 2019
2
December, 2018
1
August, 2021
1
November, 2019
Available data
64
bam
63
bed narrowPeak
63
bigWig
63
fastq
61
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
1
tar
Organism
65
Homo sapiens
Biosample type
65
cell line
23
tissue
11
in vitro differentiated cells
10
primary cell
Organ
54
liver
10
blood
10
bodily fluid
1
epithelium
1
pancreas
Project
65
AMP
Genome assembly (visualization)
62
hg19
58
GRCh38
Lab
64
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
target.investigated_as!
nucleotide modification
BIOSAMPLE
ASSAY
65 results
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ChIP-seq
cell line
HepG2
54
GM12878
10
EndoC_BH1
1
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