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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
361
transcription factor
89
recombinant protein
83
control
65
RNA binding protein
38
histone
38
histone modification
30
chromatin remodeller
19
broad histone mark
19
narrow histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
17
November, 2017
7
November, 2018
6
January, 2019
2
December, 2018
Available data
32
bam
32
bed narrowPeak
32
bigBed narrowPeak
32
bigWig
32
fastq
5
bed broadPeak
5
bigBed broadPeak
Organism
32
Homo sapiens
Biosample type
32
cell line
5
tissue
3
in vitro differentiated cells
1
primary cell
Organ
22
liver
10
blood
10
bodily fluid
Project
32
AMP
Genome assembly (visualization)
32
hg19
30
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
1
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
11
inconsistent control read length
8
inconsistent control run_type
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
cell line
HepG2
22
GM12878
10
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