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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
3
MeRIP-seq
Assay category
20
DNA binding
Target of assay
64
transcription factor
23
control
20
histone
20
histone modification
11
RNA binding protein
10
broad histone mark
10
chromatin remodeller
10
narrow histone mark
7
recombinant protein
3
nucleotide modification
Date released
9
October, 2019
3
February, 2021
3
January, 2019
3
November, 2018
3
November, 2020
2
November, 2019
Available data
20
bam
6
fastq
3
tagAlign
Organism
23
Homo sapiens
Biosample type
141
tissue
36
in vitro differentiated cells
34
primary cell
23
cell line
1
stem cell
Organ
liver
11
pancreas
6
blood
6
bodily fluid
5
epithelium
3
kidney
2
artery
2
blood vessel
2
heart
2
vasculature
Project
23
AMP
Lab
20
AMP-T2D consortium
3
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
8
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
23 results
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ChIP-seq
MeRIP-seq
cell line
GM12878
6
Panc1
6
EndoC_BH1
2
3
smooth muscle cell of the coronary artery
2
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
iPSC derived cell line
1
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