Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
301
ChIP-seq
Assay category
301
DNA binding
Target of assay
361
transcription factor
89
recombinant protein
83
control
RNA binding protein
38
histone
38
histone modification
30
chromatin remodeller
19
broad histone mark
19
narrow histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
210
November, 2017
36
November, 2018
25
December, 2018
10
August, 2021
8
January, 2019
7
October, 2019
5
February, 2021
Available data
298
bigWig
294
bed narrowPeak
290
bam
279
fastq
272
bigBed narrowPeak
40
bed broadPeak
40
bigBed broadPeak
5
tagAlign
2
tar
Organism
301
Homo sapiens
Biosample type
301
cell line
66
tissue
38
in vitro differentiated cells
Organ
246
liver
43
blood
43
bodily fluid
7
kidney
4
artery
4
blood vessel
4
heart
4
vasculature
Project
301
AMP
Genome assembly (visualization)
295
hg19
256
GRCh38
Lab
291
AMP-T2D consortium
10
Bing Ren, UCSD
Audit category:
7
inconsistent ontology term
1
inconsistent control
Audit category:
10
missing controlled_by
Audit category:
9
inconsistent control read length
5
inconsistent control run_type
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
301 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
246
GM12878
43
smooth muscle cell of the coronary artery
4
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
iPSC derived cell line
1
See all biosamples
Download