Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
380
ChIP-seq
Assay category
380
DNA binding
Target of assay
361
transcription factor
89
recombinant protein
83
control
65
RNA binding protein
38
histone
38
histone modification
30
chromatin remodeller
19
broad histone mark
19
narrow histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
249
November, 2017
57
November, 2018
25
December, 2018
14
January, 2019
12
August, 2021
11
October, 2019
7
November, 2019
5
February, 2021
Available data
374
bigWig
369
bed narrowPeak
367
bam
345
fastq
338
bigBed narrowPeak
52
bed broadPeak
52
bigBed broadPeak
11
tagAlign
3
tar
Organism
380
Homo sapiens
Biosample type
380
cell line
372
tissue
132
primary cell
105
in vitro differentiated cells
1
stem cell
Organ
306
liver
51
blood
51
bodily fluid
11
pancreas
7
epithelium
7
kidney
4
artery
4
blood vessel
4
heart
4
vasculature
Project
380
AMP
Genome assembly (visualization)
370
hg19
325
GRCh38
Lab
368
AMP-T2D consortium
12
Bing Ren, UCSD
Audit category:
14
inconsistent ontology term
1
inconsistent control
Audit category:
12
missing controlled_by
Audit category:
21
inconsistent control read length
8
inconsistent control run_type
BIOSAMPLE
ASSAY
380 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
306
GM12878
51
EndoC_BH1
7
Panc1
4
smooth muscle cell of the coronary artery
4
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
iPSC derived cell line
1
See all biosamples
Download