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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1173
total RNA-seq
176
single cell RNA-seq
16
small RNA-seq
Assay category
1365
Transcription
1065
DNA binding
513
DNA accessibility
38
DNA methylation
20
3D chromatin structure
Date released
472
February, 2021
163
August, 2021
143
May, 2020
123
May, 2021
120
July, 2018
89
August, 2017
47
July, 2019
47
September, 2023
27
May, 2022
25
February, 2020
24
October, 2019
19
November, 2019
18
February, 2023
15
February, 2018
11
March, 2020
9
April, 2020
6
April, 2018
4
May, 2023
3
December, 2019
Available data
1179
tsv
1050
bam
1044
bigWig
118
fastq
72
txt
6
csv
Organism
1365
Homo sapiens
Biosample type
1227
tissue
436
primary cell
138
in vitro differentiated cells
115
cell line
2
stem cell
Organ
466
connective tissue
399
adipose tissue
291
pancreas
174
liver
115
kidney
110
heart
62
bone element
21
brain
19
eye
13
blood vessel
13
vasculature
9
lung
7
limb
7
musculature of body
6
embryo
5
nerve
4
artery
4
epithelium
4
skeleton
1
spinal cord
Project
1302
AMP
47
KPMP
9
LungMap
7
T1D
Genome assembly (visualization)
1045
GRCh38
1045
hg19
Lab
1211
AMP-T2D consortium
60
Katalin Susztak, Upenn
47
KPMP
20
Karen Mohlke, UNC
17
Kyle Gaulton, UCSD
9
Xin Sun, UCSD
1
Bing Ren, UCSD
Audit category:
92
inconsistent ontology term
7
audit script error
BIOSAMPLE
ASSAY
1365 results
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Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
adipose tissue
382
islet of Langerhans
298
liver
167
1
1
kidney
49
64
bone tissue
58
+ See 56 more…
in vitro differentiated cells
cardiomyocytes
59
cardiac precursors (cardiac muscle cell)
19
induced pluripotent stem cell
9
embryonic stem cell
7
neural progenitor cell
7
+ See 21 more…
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