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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
79
ChIP-seq
9
total RNA-seq
4
GRO-seq
3
pCHi-C
2
single cell RNA-seq
Assay category
79
DNA binding
Target of assay
35
histone
35
histone modification
32
control
20
broad histone mark
15
narrow histone mark
12
transcription factor
5
RNA binding protein
Date released
38
May, 2021
19
August, 2017
9
August, 2021
8
February, 2018
5
December, 2017
Available data
27
bam
23
tagAlign
18
fastq
1
bed narrowPeak
1
bigWig
Organism
79
Homo sapiens
Biosample type
338
tissue
79
in vitro differentiated cells
77
cell line
32
primary cell
Organ
19
connective tissue
7
embryo
4
epithelium
1
liver
1
pancreas
Project
79
AMP
Genome assembly (visualization)
120
GRCh38
hg19
Lab
42
AMP-T2D consortium
37
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
assembly!
hg19
BIOSAMPLE
ASSAY
79 results
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ChIP-seq
in vitro differentiated cells
embryonic stem cell
38
adipocyte
19
neural progenitor cell
9
pancreatic endoderm
5
Hepatic endoderm
2
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