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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
127
total RNA-seq
17
ATAC-seq
1
DNase-seq
Assay category
127
Transcription
18
DNA accessibility
Date released
79
May, 2021
22
February, 2021
17
August, 2021
15
February, 2018
5
November, 2019
4
October, 2019
2
March, 2020
1
August, 2017
Available data
145
bam
144
bigWig
131
tsv
22
bed narrowPeak
21
fastq
7
bed bedgraph
7
bedpe bed3+
6
bed bed3+
5
bed bed3
4
hic
3
bigBed narrowPeak
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
145
Homo sapiens
Biosample type
1185
tissue
367
primary cell
145
in vitro differentiated cells
117
cell line
Organ
6
connective tissue
6
embryo
2
epithelium
1
heart
Project
145
AMP
Genome assembly (visualization)
145
GRCh38
145
hg19
Lab
145
AMP-T2D consortium
Audit category:
94
inconsistent ontology term
audit.NOT_COMPLIANT.category!
missing controlled_by
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
145 results
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total RNA-seq
ATAC-seq
DNase-seq
in vitro differentiated cells
cardiomyocytes
59
cardiac precursors (cardiac muscle cell)
19
1
neural progenitor cell
7
10
induced pluripotent stem cell
9
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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