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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
ChIP-seq
Assay category
96
DNA binding
Target of assay
96
histone
96
histone modification
49
transcription factor
48
broad histone mark
47
narrow histone mark
29
control
11
RNA binding protein
3
chromatin remodeller
Date released
37
August, 2017
24
December, 2017
21
May, 2021
February, 2018
14
August, 2021
Available data
63
bam
62
bed narrowPeak
62
bigWig
49
fastq
26
tagAlign
12
bigBed narrowPeak
8
bed bed3+
Organism
96
Homo sapiens
Biosample type
592
tissue
237
primary cell
96
in vitro differentiated cells
38
cell line
2
stem cell
Organ
37
connective tissue
15
epithelium
12
liver
6
embryo
1
pancreas
Project
96
AMP
Genome assembly (visualization)
62
GRCh38
61
hg19
Lab
76
AMP-T2D consortium
20
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
month_released!
February, 2018
BIOSAMPLE
ASSAY
96 results
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ChIP-seq
in vitro differentiated cells
adipocyte
37
embryonic stem cell
20
neural progenitor cell
14
hepatocyte
12
pancreatic endoderm
4
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