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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
40
ChIP-seq
19
total RNA-seq
5
ATAC-seq
Assay category
40
DNA binding
19
Transcription
5
DNA accessibility
Target of assay
21
histone
21
histone modification
13
transcription factor
11
narrow histone mark
10
broad histone mark
6
control
5
RNA binding protein
Date released
68
August, 2017
64
May, 2021
42
August, 2021
39
December, 2017
39
February, 2018
11
February, 2023
8
February, 2021
4
January, 2018
2
October, 2019
1
August, 2018
1
March, 2020
Available data
21
bigWig
17
bam
14
tsv
3
tagAlign
2
bed narrowPeak
Organism
64
Homo sapiens
Biosample type
205
primary cell
64
in vitro differentiated cells
40
tissue
Organ
4
epithelium
3
pancreas
1
connective tissue
1
heart
Project
64
AMP
Genome assembly (visualization)
21
hg19
16
GRCh38
Lab
47
Kyle Gaulton, UCSD
17
AMP-T2D consortium
Audit category:
inconsistent ontology term
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inconsistent ontology term
BIOSAMPLE
ASSAY
64 results
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ChIP-seq
total RNA-seq
ATAC-seq
in vitro differentiated cells
embryonic stem cell
37
5
5
induced pluripotent stem cell
9
pancreatic PP cell
3
cardiac fibroblast
1
endothelial cell
1
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