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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
total RNA-seq
43
ChIP-seq
10
ATAC-seq
Assay category
84
Transcription
43
DNA binding
10
DNA accessibility
Target of assay
21
histone
21
histone modification
16
transcription factor
11
narrow histone mark
10
broad histone mark
6
control
5
RNA binding protein
Date released
132
May, 2021
68
August, 2017
43
December, 2017
42
August, 2021
39
February, 2018
26
February, 2021
16
February, 2023
8
March, 2020
8
October, 2019
5
November, 2019
4
January, 2018
2
December, 2019
1
August, 2018
Available data
90
bam
89
bigWig
79
tsv
10
bed narrowPeak
6
tagAlign
Organism
137
Homo sapiens
Biosample type
206
primary cell
137
in vitro differentiated cells
80
tissue
37
cell line
Organ
5
epithelium
3
pancreas
2
embryo
1
connective tissue
1
heart
Project
137
AMP
Genome assembly (visualization)
94
hg19
89
GRCh38
Lab
90
AMP-T2D consortium
47
Kyle Gaulton, UCSD
Audit category:
73
inconsistent ontology term
BIOSAMPLE
ASSAY
137 results
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total RNA-seq
ChIP-seq
ATAC-seq
in vitro differentiated cells
cardiomyocytes
59
3
embryonic stem cell
5
37
5
induced pluripotent stem cell
9
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
pancreatic PP cell
3
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