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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
Hi-C
Assay category
15
3D chromatin structure
Date released
9
March, 2020
3
October, 2019
1
August, 2021
1
March, 2019
1
November, 2019
Available data
1939
bam
1741
bigWig
1207
tsv
826
bed narrowPeak
442
fastq
367
bigBed narrowPeak
220
bed bed3+
194
bed broadPeak
188
tagAlign
177
bigBed broadPeak
160
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
17
bedpe bed3+
15
hic
10
bed bed3
7
bed bedgraph
6
csv
2
ibed
1
bedpe
1
tagAlign bed3+
Organism
15
Homo sapiens
Biosample type
11
tissue
6
primary cell
4
in vitro differentiated cells
2
cell line
Organ
3
heart
3
pancreas
2
musculature of body
1
blood vessel
1
kidney
1
liver
1
vasculature
Project
15
AMP
Genome assembly (visualization)
15
hg19
Lab
13
AMP-T2D consortium
1
Bing Ren, UCSD
1
Katalin Susztak, Upenn
Audit category:
4
inconsistent ontology term
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
15 results
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Hi-C
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
+ See 4 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
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