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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
2
total RNA-seq
Assay category
15
DNA binding
2
Transcription
Target of assay
15
histone
15
histone modification
8
narrow histone mark
broad histone mark
4
control
3
transcription factor
2
RNA binding protein
1
chromatin remodeller
Date released
12
December, 2017
5
May, 2021
Available data
17
bam
13
bigWig
12
fastq
11
bed narrowPeak
7
bigBed narrowPeak
3
tagAlign
2
tsv
Organism
17
Homo sapiens
Biosample type
375
primary cell
73
cell line
17
in vitro differentiated cells
15
tissue
Organ
connective tissue
25
embryo
17
epithelium
8
liver
3
pancreas
1
adipose tissue
1
heart
Project
17
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
17
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
Audit category:
1
inconsistent control read length
target.investigated_as!
broad histone mark
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
17 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
hepatocyte
8
Hepatic endoderm
4
pancreatic PP cell
3
endothelial cell
1
intermediate endothelial cell
1
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