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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
Assay category
56
DNA binding
Target of assay
112
histone
112
histone modification
broad histone mark
55
narrow histone mark
49
transcription factor
37
control
11
RNA binding protein
3
chromatin remodeller
Date released
17
August, 2017
13
December, 2017
11
May, 2021
8
February, 2018
7
August, 2021
Available data
42
bam
41
bed narrowPeak
41
bigWig
34
fastq
12
tagAlign
5
bigBed narrowPeak
4
bed bed3+
Organism
56
Homo sapiens
Biosample type
309
tissue
115
primary cell
56
in vitro differentiated cells
19
cell line
1
stem cell
Organ
17
connective tissue
8
embryo
8
epithelium
5
liver
1
pancreas
Project
56
AMP
Genome assembly (visualization)
41
GRCh38
41
hg19
Lab
46
AMP-T2D consortium
10
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
2
inconsistent control read length
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
56 results
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ChIP-seq
in vitro differentiated cells
adipocyte
17
embryonic stem cell
11
neural progenitor cell
7
pancreatic endoderm
6
hepatocyte
5
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